Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886560.1_cds_XP_016440696.1_36129
CDS Infomation

[gene=LOC107766429] [db_xref=GeneID:107766429] [protein=E3 ubiquitin-protein ligase MBR2-like] [protein_id=XP_016440696.1] [location=join(16702..17811,17909..17959,18042..18140,18574..18738,19412..19546)] [gbkey=CDS]
Sequence

ATGGATGAATATTCGAGCAAAAGAGCTGTTAATGGACTTTACGTTCCCAGAAGAGGTTTG
AGAGATATAGCTGACAGCAGGGATGAAAATGTTCAGTTGTGCTCCCGATATGGATGCAGC
AGCCGACTCAACTCTATGAAGAGCCCGCAAGTTAAATGTACAGAGAAACCAAGACCTTTC
AAGCCTTCTTTCACTTCTTCAAATGGAAAAGACGTTGTTGGGAGTTCATCTCGAACATCG
TCTAGTGCTAGAAAGTCACTCAAGGAATCCCACATTAAATCCTTTTCTCACGTTGAAAAT
GATCAATCTGAAACTACTTGTTTACATGGTGAGCAGCCTGATGTTCCACGCCACATGAAG
TCATCAAAAGCGCAGCAACCCCAATTCGATTCAGTAATGCGAGATACTGGATCAAGTAAA
ATTATATTGGCAGAAGTAGGTGGCTCTAGTGGAGCTTCAAGCAGTAAACCTCGTAGATTA
TTTAGTCCAAAGTATTCCAATCAAAACAGTCCAGTAGGTTCCTCTGTTTCTTCATCATCT
AAGGCCATTGGTGCAGGGACAAGGGGAACTTCTAGTGGGGCTGGATATGTGCCGAGAAAT
CTAAAATGCAATTCAGGATCAGATGTCTCTTTAACAACAAATTCAAGATTTAGTAGAAGG
GACATGGTAAAAAGAGGGAACTCAGAAGGTGAAAGCAGTTCATCCTCTAAAGGGAAGAAA
GTAAGTGGGGCATCACCAAAAGAAGGAGATGTCATTCGTCCAACGCGTGGTGGTATCACA
ATTTCTGATTCAAGGGGTAGTAAAAACTTCGATGTTAGGGTGGATAATCGTGCTGTATCA
GTTAGGACTCGTAGGTCAATGAATGTGCCTAGGTTTAGGGATTCAATACGAGATTCGTCA
TCTCAGCCTGAATCTCCAAATCTCAGTCTGCAATCATCAAGTCAGTTTTTCTCAGATGCC
TCTTCGAGCGATTCCAGTGCTTATAGTTTTTCTGGAAATGATGTTGAAGATTTCCCAGCT
GAAGTGCATGGCACTTCTGCAGAACTAGGCATCAACCAATTAATAAACCGTGACGCCTTG
CAGCGATATAACATGGATGGAGTTGCTCAGGTACTGGTGGCACTAGAGAGAATGGAACAA
GATGAAGAATTAACATATGAGCAACTACTTGTGTTAGAGACCAACTTGTTTCTTGGTGGC
CTTAACTTCTATGACCAGCATAGAGGTATGAGACTGGATATAGACAATATGTCCTATGAG
GAATTATTAGCTCTTGAGGAAAGGATGGGCAGTGTTAGCACAGCTCTACCAGAGGAGGCA
TTGCCAAAGTGCCTCCGGAAAAGCATATATCAGGCTATGCCTTCAGAAATGGGGGAATTT
GGTAGCGATGGGAATGAAGATGAGATCAAATGCACTATTTGTCAGGAGGAATATATGATT
GGAGATGAAATAGGAAGGTTGGAATGTGACCATGGTTATCATGTGGAGTGTGTACAACAG
TGGTTGAGGCACAAGAATTGGTGTCCTATATGCAAATCTTCAGCAGCTCCATCATCTTAG

Peptide Sequence

PEP ID

XP_016440696.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase MBR2-like [Nicotiana tabacum]
Sequence

MDEYSSKRAVNGLYVPRRGLRDIADSRDENVQLCSRYGCSSRLNSMKSPQVKCTEKPRPF
KPSFTSSNGKDVVGSSSRTSSSARKSLKESHIKSFSHVENDQSETTCLHGEQPDVPRHMK
SSKAQQPQFDSVMRDTGSSKIILAEVGGSSGASSSKPRRLFSPKYSNQNSPVGSSVSSSS
KAIGAGTRGTSSGAGYVPRNLKCNSGSDVSLTTNSRFSRRDMVKRGNSEGESSSSSKGKK
VSGASPKEGDVIRPTRGGITISDSRGSKNFDVRVDNRAVSVRTRRSMNVPRFRDSIRDSS
SQPESPNLSLQSSSQFFSDASSSDSSAYSFSGNDVEDFPAEVHGTSAELGINQLINRDAL
QRYNMDGVAQVLVALERMEQDEELTYEQLLVLETNLFLGGLNFYDQHRGMRLDIDNMSYE
ELLALEERMGSVSTALPEEALPKCLRKSIYQAMPSEMGEFGSDGNEDEIKCTICQEEYMI
GDEIGRLECDHGYHVECVQQWLRHKNWCPICKSSAAPSS

Transcript Sequence

Gene sequence data has not been registered.